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Department of Biochemistry, Molecular Biology, and Biophysics, University of Minnesota, Minneapolis, Minnesota 55455
1To whom requests for reprints should be addressed at Department of Biochemistry, Molecular Biology, and Biophysics, 6155 Jackson Hall, 321 Church Street, University of Minnesota, Minneapolis, MN 55455. E-mail: armit001{at}umn.edu
Abstract
Metallothionein (MT)-3, originally called growth inhibitory factor (GIF), was initially identified through its ability to inhibit the growth of neuronal cells in the presence of brain extract. MT-3 is the brain specific isoform of the MT family whose specific biological activity associates it with neurological disorders. Indeed, studies report that MT-3 is decreased by ~30% in brains of patients with Alzheimer disease (AD). Furthermore, many lines of evidence suggest that MT-3 engages in specific protein interactions. To address this, we conducted immunoaffinity chromatography experiments using an immobilized anti-mouse MT-3 antibody. We identified five associated proteins from the pool of sixteen recovered using mass spectrometry and tandem mass spectrometry after in-gel trypsin digestion of bands from the affinity chromatography. The proteins identified were: heat shock protein 84 (HSP84), heat shock protein 70 (HSP70), dihydropyrimidinase-like protein-2 (DRP-2), creatine kinase (CK) and ß-actin. Coimmunoprecipitation experiments, also conducted on whole mouse brain extract using the anti-mouse MT-3 antibody along with commercially available antibodies against HSP84 and CK, confirmed that these three proteins were in a single protein complex. Immunohistochemical experiments were then conducted on the perfused mouse brain that confirmed the in situ colocalization of CK and MT-3 in the hippocampus region. These data provide new insights into the involvement of MT-3 in a multiprotein complex, which will be used to understand the biological activity of MT-3 and its role in neurological disease.
Key Words: metallothionein-3 Alzheimer disease immunoaffinity chromatography multiprotein complex
Introduction
Metallothioneins (MTs) are a class of small (67 kDa) cysteine-rich proteins that bind both essential (Cu+ and Zn2+) and nonessential (Cd2+, Ag+, and Hg2+) metal ions with the highest per mole metal content after ferritins (1). MTs bind metals with a high thermodynamic but low kinetic stability. Therefore, metal binding is very tight; however, there is facile metal exchange with other proteins (2). Based on the Fowler classification, MTs were grouped into three classes (I, II, and III), with class I being MTs in which the locations of cysteine residues closely resemble equine renal MT (3). The purification of more than 300 sequences of MTs in different species (Swiss Databank; http://us.expasy.org/) has allowed the determination of a new classification based on phylogenetic and evolutionary considerations (4). According to this classification the MTs are divided into families, subfamilies, subgroups, and isoforms. Ninety-nine families were identified, with family 1 representing vertebrate forms and family 99 the phytochelatins (4).
In mammalian MTs, there are currently four known isoforms, which are designated MT-1, 2, 3, and 4 (5). MT-1 and 2 are expressed in most organs, especially in the kidney and liver, and are similar with respect to their metal-binding characteristics. Binding of divalent Zn2+ and Cd2+ metal ions occurs in two separate domains of MT-1 and MT-2: the N-terminal ß-domain binds three metals in Me3S9 coordination, whereas the C-terminal
-domain binds four metals in Me4S11 coordination (68). The metal cluster arrangement is inverted in sea urchin MTA, in which four metals are bound in the N-terminal domain and three in the C-terminal cluster (9). Only six metals are bound in two 3-metal clusters in the crustacean MTI from the mud crab Scylla serrata (10) and the blue crab Callinectes sapidus (11).
MT-1 and MT-2 are thought to function in the homeostasis of zinc and copper as well as in the detoxification of heavy metals (5, 12). The kinetically labile metal ions in the ß-domain can be released by oxidized glutathione, reactive oxygen species, and nitric oxide (1315).
MT-3 was discovered in brain tissue as a protein that inhibits the growth of neurons in the presence of brain extracts from Alzheimer disease (AD) patients (1618). Its growth inhibitory activity was established to reside in the N-terminal ß-domain, and mutations of proline residues at positions 7 and 9 were found to abolish this activity (19, 20). It should be mentioned that MT-3 has also been found in numerous cancers, including that of the human kidney (21, 22).
To date, the native metal form of MT-3, Cu4+Zn42+ has not been structurally characterized; however, spectroscopic studies, nuclear magnetic resonance (NMR) studies on (Cd7MT-3), and biological activity studies have provided some fundamentally important information about this protein. Of primary importance is the finding that its biological activity is associated with the ß-domain (20), which binds 4 moles of Cu+ that are very stable against oxidation (23). NMR studies on Cd7MT-3 revealed a dynamically disordered ßdomain and a structured Cd42+
-domain, which was superimposable with the
-domains of MT-1 and 2 except for an unstructured hexapeptide insert (24). Intrigued by the oxidatively stable Cu+ metal ions in the biologically active ß-domain, which has thus far resisted structural characterization, a literature search was conducted that revealed the crystal structure of a polynuclear Cu+ thiolate complex containing four coppers and nine thiols (25). In yet to be published work from our laboratory,1 the structure of the Cu4+S9 core from the model complex, which consists of three tetrahedrally-coordinated Cu+ and one trigonally-coordinated Cu+, has been modeled into the homology-modeled ß-domain of Cd7MT-3, followed by energy minimization and dynamic refinement. The result reveals a very compact ß-domain structure, with no Cu+ ions accessible to water in a Connolly surface representation of the protein, consistent with the oxidative stability of Cu+ in MT-3.
Unlike MT-1 and MT-2, MT-3 is not induced by heavy metals, indicating that this isoform is regulated differently (26). The MT-3 and MT-1 isoforms respond differently to zinc deprivation of cells in culture, as only MT-1 is downregulated under these conditions (27). Transcriptional regulation of MT-3 also differs from MT-1 and MT-2, suggesting that MT-3 is not involved in metal ion homeostasis as MT-1 and MT-2 seem to be (2831). Overexpressed MT-3 colocalizes with Zn2+ in mouse neurons (32, 33). ZnMT-3, but not ZnMT-1, is able to inhibit the growth of neuronal cells in the presence of AD brain extract; however in the absence of added AD brain extract, both ZnMT-1 and ZnMT-3 stimulate neuronal growth (20). These studies support a function of MT-3, distinct from the toxic effect of Cd(II) or Cu(I) complexes of MT-3 on neurons (20), that appears to be associated with its specific structural features. The unique biological functions of MT-3 indicate its involvement in different signaling pathways and lend support to the hypothesis that there are specific interacting proteins that mediate its functionality.
AD is among the processes linked to MT-3: some studies of AD tissue have shown that MT-3 mRNA is decreased (34, 35), although other reports did not observe any decrease (36, 37). Likewise, zinc and copper have been implicated in AD (38). Copper binds with attomolar affinity to ß-amyloid (39), and the neurotropic and neurotoxic effects of ß-amyloid are supported by low and high levels of zinc, respectively (40, 41). MT-3, but not MT-1 or MT-2, has also been reported to modulate both the neurotropic and neurotoxic effects of ß-amyloid (42). These data implicate overlapping functions of MT-3 and metal ions in normal neuronal function, and specifically in AD, although a direct connection has yet to be established.
MT-3 in Mouse Brains
Antiserum selective for mouse brain MT-3 was prepared (43) using recombinant mouse Cd7MT-3 (24). The antiserum was found to be essentially specific for MT-3 with 100-fold greater sensitivity for MT-3 than MT-1 or MT-2. The antiserum was used in subsequent experiments essentially as a MT-3 specific antiserum. This antiMT-3 antibody preparation was found to immunoprecipitate purified, recombinant MT-3 and MT-3 from a cellular extract. Immunoprecipitation of pure, recombinant mouse brain MT-3 showed that as little as 0.30 µg could be immunoprecipitated and detected by subsequent Western blotting (43).
MT-3 Partner Proteins
Proteins associated with MT-3 in Swiss Webster mouse brains were isolated using immunoaffinity chromatography over immobilized anti-mouse brain MT-3 antibodies (44). Proteins were identified by separation on sodium dodecyl sulfatepolyacrylamide gel electrophoresis (SDS-PAGE), digestion of bands with trypsin, and comparison of peptides obtained by mass spectrometry to the Mascot database (NCBI; http://matrixscience.com). Multiple protein bands were detected and we have identified five thus far: heat shock protein 84 (HSP84; mouse variant of heat shock protein [HSP]90), heat shock protein 70 (HSP70), dihydropyrimidinase-like protein-2 (DRP-2), creatine kinase (CK), and ß-actin (Fig. 1
). Additional protein bands were also analyzed, but insufficient sequence information was recovered for their identification by comparison to the Mascot database.2 Noteworthy in this regard is the report by Kang et al. (45), who detected 22 signals for potential MT-3interacting proteins using the yeast two-hybrid system. Of these signals, only the protein responsible for the strongest signal was identifiedRab3A, which was subsequently characterized using affinity precipitation and surface plasma resonance analysis (46). Because Rab3A is involved in synaptic vesicle function and neurotransmitter release, this interaction associates MT-3 with the possible regulation of neuronal signaling. Indeed, only a combination of MT-3 and Rab3A could block Zn-induced neuronal death; neither MT-3 nor Rab3A alone were able to block the neurotoxic effects of zinc (47). This finding is consistent with the hypothesis that the physiological function of MT-3 requires interactions with other proteins.
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Immunohistochemical Localization of MT-3 and Partner Proteins in Mouse Brain
Immunochemical assays have provided supporting evidence for the in situ association of MT-3 with partner proteins. Immunohistochemistry was performed using cryosections of mouse brain tissue obtained from mice that were deeply anesthetized with sodium pentobarbital (150 mg/kg ip) and after being perfused via the ascending aorta with saline and 4% paraformaldehyde in 0.1 M phosphate buffer, pH 7.4. Initial localization studies were done using normal mouse brain tissue. After protocols were established using normal mice, localization studies of MT-3associated proteins were performed with brain tissue from a 24-month old Tg2576 mouse model of AD (48). It is noteworthy that amyloid deposition is pronounced in the hippocampus in Tg2576 mouse brains (49) and, therefore, attention was focused on the hippocampus in these preliminary experiments.
In the hippocampus, MT-3 was localized predominantly in CA1 and CA3 cells, as shown in Figure 2
. Double labeling experiments revealed colocalization of MT-3 with NeuN (neuron nuclei, a marker protein for neuronal cells), confirming that MT-3 is found in neurons. Similar double labeling experiments showed that CK is also colocalized with NeuN in CA1 and CA3 neurons. From this, we conclude that MT-3 and CK are present in the same hippocampal neurons, a first step toward establishing the physiological significance of the in vitro biochemically-defined multiprotein complex. These results are consistent with other reports on the hippocampal localization of MT-3 and CK (5052). Furthermore, MT-3 has been localized in CA1-CA3 pyramidal and dentate gyrus granule neurons and is implicated in regulating the zinc release that influences the viability of hippocampal cells (53).
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Using MT-3specific antiserum, the amount of MT-3 protein in whole brain homogenates from the Tg2576 transgenic positive mouse model of AD was determined (48, 54, 55). Twenty-twomonth old transgenic positive mice exhibited a 27% decrease in MT-3 (normalized to total protein) compared with same age, transgenic negative control mice (55). The decrease in MT-3 is attributed to its degradation in response to the pathological changes that develop in this mouse model of AD.
These data are consistent with the decrease in MT-3 found in human AD brains by other investigators (34, 35). Western blot analysis of proteins in brain samples from AD patients revealed that MT-3 was decreased by 29% and 55%, respectively, in the frontal and temporal cortexes (35). In contrast, using an anti-rat MT-3 antibody, Carrasco et al. (56) reported an increase of the amount of human MT-3 in brain samples from AD patients, possibly because of species differences in the antibodies used.
Consequences of Altered MT-3 Concentration
Because MT-3 has been shown to inhibit neuronal growth in culture, a plausible explanation for the decrease in MT-3 could be a compensatory mechanism used by neurons to maintain viability. An alternative explanation is that MT-3 serves a neuroprotective function and prevents the development of AD. Decreasing MT-3 induced by amyloid plaque formation may be a necessary step for the progression of AD. MT-3 has been reported to prevent the neurotoxicity of nitric oxide (NO), and injection of mice with inhibitors of nitric oxide synthase (NOS) is associated with the subsequent increase of MT-3 and MT-1 in both brain and liver (57, 58). These data are evidence of an inverse relationship between NOS activity and MT levels, and prompted us to conduct experiments to probe for the levels and activity of NOS in the mouse brain. We found a decrease in the level of neuronal (n)NOS, but the nNOS protein present had increased NOS specific activity. There was a statistically significant decrease (33%) of nNOS in AD transgenic positive mice compared with transgenic negative mice with no significant change in total protein. NOS specific activity was found to be increased by 58% in transgenic positive mice compared with transgenic negative mice (55). These changes in NOS activity are consistent with the altered viability of NOS-positive neurons (59, 60) and with observations from AD brains (61, 62). Amyloid production results in increased NO, which acts as a neurotoxic agent (63). Neuronal NOSpositive neurons kill neighboring neurons, while nNOS-positive neurons are protected by the action of Mn-superoxide dismutase (64). Our observed increase in the specific activity of NOS in the AD mouse model is consistent with the reported neurotoxic function of NO and indicates an inverse relationship between NOS activity and MT levels. This trend suggests that NOS and MT function in opposition. Thus, signaling events that result in increased amyloid production are expected to yield increased NO and decreased MT-3. A simple working model is shown in Figure 3
.
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In summary, these observations indicate that the proteins thus far identified in our studies are associated with one another and targeted to respond similarly to changes in the cellular environment. A transitional model (Fig. 4
) of these interactions has been proposed based on these data and information published in other reports. This model adequately incorporates the interaction of MT-3 and its partners with the conflicting interactions of NO and NOS. HSP84 is also critical to understanding the biological functions of NOS because its human variant, HSP90, has been shown to activate human brain nNOS. The presence, however, of CK in the complex is intriguing inasmuch as this protein is reduced in AD brains (65).
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Acknowledgments
The authors are grateful to Dr. Karen Hsiao-Ashe (University of Minnesota) for providing Tg2576 mice. The immunohistochemical experiments using perfused mouse brains and fluorescence secondary antibodies would not have been possible without the assistance of Drs. G.J. Giesler, Jr., and H. Truong. Andrew A. Davis, Marc A. Denn, Brendan S. Doms, Patrick T. McCarthy, and Abby Tokheim are thanked for technical assistance with the preparation of recombinant Cd7MT3 and the analysis of whole brain extracts. A.A. Davis, B.S. Doms, and P.T. McCarthy were participants of the Breck School Advanced Science Research Program (Golden Valley, Minnesota) coordinated by Lois Fruen of the Breck School. The authors are grateful to Mrs. Fruen for her efforts. The authors gratefully acknowledge the efforts of the staff of the Proteomics Analysis Core and the Mass Spectrometry Consortium for the Life Sciences of the University of Minnesota.
Footnotes
This research was supported by funds from the Minnesota Medical Foundation (I.M.A. and B.L.M.) and the University of Minnesota Graduate School (I.M.A.).
1 J.D. Hoekman and I.M. Armitage, manuscript in preparation. ![]()
2 I. El Ghazi, B.L. Martin and I.M. Armitage, manuscript in preparation. ![]()
References
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